Difference between revisions of "BioPortal UI URLs"
Jump to navigation
Jump to search
| (2 intermediate revisions by the same user not shown) | |||
| Line 18: | Line 18: | ||
* http://bioportal.bioontology.org/visualize/{ontology_version_id}?conceptid={concept_id} | * http://bioportal.bioontology.org/visualize/{ontology_version_id}?conceptid={concept_id} | ||
** Example: http://bioportal.bioontology.org/visualize/42838/?conceptid=Roller_Bottle | ** Example: http://bioportal.bioontology.org/visualize/42838/?conceptid=Roller_Bottle | ||
| − | * http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id} ( | + | * http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id} (redirects to most recent version) |
** Example: http://bioportal.bioontology.org/visualize/virtual/1032/?conceptid=Roller_Bottle | ** Example: http://bioportal.bioontology.org/visualize/virtual/1032/?conceptid=Roller_Bottle | ||
| + | |||
| + | ==Annotator== | ||
| + | *http://bioportal.bioontology.org/annotator | ||
| + | *Parameters | ||
| + | **semantictype={comma-separated list of semantic type codes} | ||
| + | **ontologyid={comma-separated list of ontology version identifiers} | ||
| + | **Example: http://bioportal.bioontology.org/annotator?semantictype=T002,T020&ontologyid=39215,40223 | ||
==Resource Index== | ==Resource Index== | ||
| Line 25: | Line 32: | ||
* Resources for a term: http://bioportal.bioontology.org/visualize/{ontology_version_id}/?conceptid={concept_id}#resource_index | * Resources for a term: http://bioportal.bioontology.org/visualize/{ontology_version_id}/?conceptid={concept_id}#resource_index | ||
** Example: http://bioportal.bioontology.org/visualize/42838/?conceptid=Melanoma#resource_index | ** Example: http://bioportal.bioontology.org/visualize/42838/?conceptid=Melanoma#resource_index | ||
| − | * http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id}#resource_index ( | + | * http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id}#resource_index (redirects to most recent version) |
** Example: http://bioportal.bioontology.org/visualize/virtual/1032/?conceptid=Melanoma#resource_index | ** Example: http://bioportal.bioontology.org/visualize/virtual/1032/?conceptid=Melanoma#resource_index | ||
Latest revision as of 16:34, 21 April 2011
The following is a list of standard URLs that can be used with the BioPortal Ruby on Rails User Interface.
Ontology Metadata
- http://bioportal.bioontology.org/ontologies/{ontology_version_id}
- http://bioportal.bioontology.org/ontologies/virtual/{ontology_virtual_id} (redirects to most recent version)
Ontology Visualization
- http://bioportal.bioontology.org/visualize/{ontology_version_id}
- http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id} (redirects to most recent version)
- DEPRECATED: http://bioportal.bioontology.org/virtual/{ontology_virtual_id} (redirects to most recent version)
Term in an Ontology
- Note: Terms should be URL-encoded
- http://bioportal.bioontology.org/visualize/{ontology_version_id}?conceptid={concept_id}
- http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id} (redirects to most recent version)
Annotator
- http://bioportal.bioontology.org/annotator
- Parameters
- semantictype={comma-separated list of semantic type codes}
- ontologyid={comma-separated list of ontology version identifiers}
- Example: http://bioportal.bioontology.org/annotator?semantictype=T002,T020&ontologyid=39215,40223
Resource Index
- http://bioportal.bioontology.org/resources
- Resources for a term: http://bioportal.bioontology.org/visualize/{ontology_version_id}/?conceptid={concept_id}#resource_index
- http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id}#resource_index (redirects to most recent version)
Notes
- Notes for an ontology: http://bioportal.bioontology.org/ontologies/{ontology_version_id}#notes
- Notes for a term: http://bioportal.bioontology.org/visualize/{ontology_version_id}#notes