Difference between revisions of "PATO Meeting"
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==Minutes and Powerpoint Slides== | ==Minutes and Powerpoint Slides== | ||
| − | Day 2 | + | Minutes from Day 2 [[Media:Meeting_Notes.pdf]] |
| + | |||
| + | Gully Burns: Ontology engineering approaches based on semi-automated curation of the primary literature [[Media:GullyBurns.ppt]] | ||
| + | Alexander Garcia: The use of concept maps and automatic terminology extraction during development of a domain ontology: Lessons learnt [[Media:AlexanderGarcia.ppt]] | ||
| + | Adrien Coulet: Suggested ontology for pharmacogenomics (SO-Pharm): modular construction and preliminary testing [[Media:Adrien Coulet.pdf]] | ||
| + | Tina Hernandez-Broussard: Challenges for representing phenotype in pharmacogenomics [[Media:TinaHernandez.ppt]] | ||
| + | James Reecy: A project for the Creation of a Unified Trait Vocabulary for Farm Animals [[Media:JamesReecy.ppt]] | ||
| + | Victoria Petri: Rat genome database disease portals: a platform for genetic and genomic research [[Media:VictoriaPetri.ppt]] | ||
| + | Carol A. Bastiani: WormBase phenotype ontology development, curation, and data integration [[Media:CarolBastiani.ppt]] | ||
| + | Janan Eppig: Ontologies and vocabularies supporting data integration: emphasis on mouse phenotypes and disease [[Media:JananEppig.ppt]] | ||
| + | Rex Chisholm: Phenotype curation tool and ontologies at dictyBase [[Media:RexChisholm.ppt]] | ||
| + | Minna Lehvaslaiho: HIV [[Media:MinnaLehvaslaiho.ppt]] | ||
| + | Eurie Hong: Yeast [[Media:EurieHong.ppt]] | ||
| + | Tanya Berardini: Arabidopsis [[Media:TanyaBerardini.ppt]] | ||
| + | Christopher Smith: Insect behavior [[Media:ChristopherSmith.ppt]] | ||
| + | Michael Ashburner: Drosophila (live demo, no slides) | ||
| + | Maryann Martone: BIRN | ||
| + | Jim Balhoff: NESCENT [[Media:JimBalhoff.pdf]] | ||
Revision as of 10:17, 4 December 2006
General Information and Registration
The National Center for Biomedical Ontology will host a two-day meeting focused on the Phenotype and Trait Ontology (PATO) December 1-2, 2006 at Stanford University in Palo Alto, CA.
Agenda
Media:Pheno_workshop_Dec2006.pdf
Minutes and Powerpoint Slides
Minutes from Day 2 Media:Meeting_Notes.pdf
Gully Burns: Ontology engineering approaches based on semi-automated curation of the primary literature Media:GullyBurns.ppt Alexander Garcia: The use of concept maps and automatic terminology extraction during development of a domain ontology: Lessons learnt Media:AlexanderGarcia.ppt Adrien Coulet: Suggested ontology for pharmacogenomics (SO-Pharm): modular construction and preliminary testing Media:Adrien Coulet.pdf Tina Hernandez-Broussard: Challenges for representing phenotype in pharmacogenomics Media:TinaHernandez.ppt James Reecy: A project for the Creation of a Unified Trait Vocabulary for Farm Animals Media:JamesReecy.ppt Victoria Petri: Rat genome database disease portals: a platform for genetic and genomic research Media:VictoriaPetri.ppt Carol A. Bastiani: WormBase phenotype ontology development, curation, and data integration Media:CarolBastiani.ppt Janan Eppig: Ontologies and vocabularies supporting data integration: emphasis on mouse phenotypes and disease Media:JananEppig.ppt Rex Chisholm: Phenotype curation tool and ontologies at dictyBase Media:RexChisholm.ppt Minna Lehvaslaiho: HIV Media:MinnaLehvaslaiho.ppt Eurie Hong: Yeast Media:EurieHong.ppt Tanya Berardini: Arabidopsis Media:TanyaBerardini.ppt Christopher Smith: Insect behavior Media:ChristopherSmith.ppt Michael Ashburner: Drosophila (live demo, no slides) Maryann Martone: BIRN Jim Balhoff: NESCENT Media:JimBalhoff.pdf
Venue
Stanford University Clark Center, room S360
Directions to Stanford Medical Center
Map of Stanford Medical Center--see "C", Clark Center
Directions on taking Free Marguerite Shuttle Bus--take Line A to Medical Center
Accommodations
We aren't reserving a block of rooms anywhere, but these local hotels are close by and have Stanford shuttle service.