Difference between revisions of "SO:Main Page"
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The [[SO term rationale]] is an on going endeavour to provide explanations of the terms in the ontology. This will include links to the mailing list discussion of the terms, and the minutes of meetings etc. | The [[SO term rationale]] is an on going endeavour to provide explanations of the terms in the ontology. This will include links to the mailing list discussion of the terms, and the minutes of meetings etc. | ||
| − | ==SO | + | ==SO Composite Terms== |
| − | SO contains various 'cross products', computable definitions that provide a coherent logical framework for composite terms in the ontology. | + | SO contains various pre-coordinated '''cross products''', computable definitions that provide a coherent logical framework for composite terms in the ontology. |
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| + | ; [[SO:Composite_Terms]] -- implementation details | ||
==FAQ== | ==FAQ== | ||
Latest revision as of 17:55, 25 January 2007
SO - Sequence Ontology
Welcome to the Sequence Ontology wiki.
Resources
Ontology
The Sequence Ontology is currently hosted at: http://song.sourceforge.net
The ontology terms can be browsed using miSO: http://song.sourceforge.net/SO_view/index.html
Request tracker
Term tracker: http://sourceforge.net/tracker/?group_id=72703&atid=810408
Mail Lists
The developers mailing list: http://sourceforge.net/mail/?group_id=72703
Term rationale
The SO term rationale is an on going endeavour to provide explanations of the terms in the ontology. This will include links to the mailing list discussion of the terms, and the minutes of meetings etc.
SO Composite Terms
SO contains various pre-coordinated cross products, computable definitions that provide a coherent logical framework for composite terms in the ontology.
- SO:Composite_Terms -- implementation details
FAQ
SO FAQ: http://song.sourceforge.net/SOFAQ.shtml
Events
SO workshop for plasmids, phages, transposons and other mobile elements. The workshop will be held at the Wellcome Trust Convention Centre, Hinxton, on September 18-19th 2006. http://song.sourceforge.net/workshop.shtml
Publications
The Sequence Ontology: A tool for the unification of genome annotations.
Eilbeck K., Lewis S.E., Mungall C.J., Yandell M., Stein L., Durbin R., Ashburner M Genome Biology (2005) 6:R44
Sequence Ontology Annotation Guide.
Karen Eilbeck and Suzanna E. Lewis. Comparative and Functional Genomics (2004) 5:642-647