Difference between revisions of "SWAT4LS Tutorial"
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* Computer with Internet connection | * Computer with Internet connection | ||
* Software editor of your choice | * Software editor of your choice | ||
| − | * Sample code will be demonstrated in both Java and Perl | + | * Sample code will be demonstrated in both Java and Perl https://bmir-gforge.stanford.edu/gf/project/client_examples/scmsvn/?action=browse&path=%2Ftrunk%2F |
* Nice to Have | * Nice to Have | ||
** [https://addons.mozilla.org/en-US/firefox/addon/http-resource-test/ Firefox HTTP Resource Test Plugin] | ** [https://addons.mozilla.org/en-US/firefox/addon/http-resource-test/ Firefox HTTP Resource Test Plugin] | ||
Revision as of 05:10, 7 December 2011
Web Services and Development of Semantic Applications
- Presented by Trish Whetzel (whetzel _at_ stanford.edu) at the SWAT4LS 2011 Conference
What You Need to Participate
- BioPortal API Key - get your API Key by registering for an account on BioPortal
- Computer with Internet connection
- Software editor of your choice
- Sample code will be demonstrated in both Java and Perl https://bmir-gforge.stanford.edu/gf/project/client_examples/scmsvn/?action=browse&path=%2Ftrunk%2F
- Nice to Have
- Firefox HTTP Resource Test Plugin
- Firefox API Key Add-on
- Some experience with parsing XML
- Java - Sax/DOM
- Perl - LibXML
Content
- Introduction to REST Web services
- NCBO BioPortal
- NCBO REST Web services
- Ontology Web services - Search, Traverse, Download
- View Extraction Web service - Subset
- Notes Web service - Propose Terms, Comment
- Mapping Web services - Create, Upload, Download
- Widgets - Tree view, Auto-complete, Graph view
- Annotation - Ontology Term recognition
- Data Access - Fetch ontology-indexed data
- BioPortal SPARQL Endpoint - Access Ontologies via SPARQL
Slides
- Slides will be posted after the Tutorial
NCBO Sample Code Cookbook
- Visit the Sample Code Cookbook to see ontology-based uses cases and solutions using the NCBO Web services
- Add you own use case and solution!!!
NCBO Users
- Email NCBO Users to contact other users and our NCBO support staff with your questions
Keep in Touch
Back to Dissemination/Outreach Main Wiki page
http://www.bioontology.org/wiki/index.php/Dissemination_Wiki