Difference between revisions of "DRAFT AGENDA"
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| Line 13: | Line 13: | ||
Topics: | Topics: | ||
| − | Types of pathways | + | ::Types of pathways (signalling pathways, metabolic pathways, ...) |
| − | Types of networks | + | ::Types of networks (regulatory networks, interaction networks, gene expression correlation networks, physiological networks, neurocurrent networks, water balance networks, social networks, co-citation networks ...) |
| − | Granularity (molecular, cellular, physiological) ... | + | ::Types of regulation (hormone regulation, organismal regulation, thermal regulation, blood pressure regulation ...) |
| + | ::Granularity (molecular, cellular, physiological) ... | ||
| + | ::What are the nodes? (molecules, pools of molecules?) | ||
* 1:00pm Lunch Break | * 1:00pm Lunch Break | ||
* 2:00pm Session 3: Existing Resources in Network and Pathway Ontology (Moderator: TBD) | * 2:00pm Session 3: Existing Resources in Network and Pathway Ontology (Moderator: TBD) | ||
| − | Ken Fukuda: IMOH | + | ::Ken Fukuda: IMOH |
| − | Balaji S. Srinivasan: Current Progress on Network Ontology | + | ::Balaji S. Srinivasan: Current Progress on Network Ontology |
| − | Peter d'Eustachio: Reactome | + | ::Peter d'Eustachio: Reactome |
| − | BioPAX | + | ::BioPAX |
| − | |||
* 3:15pm Refreshment Break | * 3:15pm Refreshment Break | ||
| Line 30: | Line 31: | ||
* 3:30pm Session 4: What are the Gaps (Moderator: Alan Ruttenberg) | * 3:30pm Session 4: What are the Gaps (Moderator: Alan Ruttenberg) | ||
| − | Possible presenters? | + | ::Possible presenters? |
* 5:00pm End of Day 1 | * 5:00pm End of Day 1 | ||
| Line 40: | Line 41: | ||
* 9:00am Session 3: Networks and Modules (Moderator: Richard Scheuermann) | * 9:00am Session 3: Networks and Modules (Moderator: Richard Scheuermann) | ||
| − | Possible presenters? | + | ::Possible presenters? |
* 10:45am Refreshment Break | * 10:45am Refreshment Break | ||
| Line 47: | Line 48: | ||
(Moderator: Yves Lussier) | (Moderator: Yves Lussier) | ||
| − | Possible presenters? | + | ::Possible presenters? |
* 1pm Lunch Break | * 1pm Lunch Break | ||
Revision as of 12:54, 29 January 2008
Preliminary Agenda
Thursday, March 27, 2008
- 9:00am Registration and Continental Breakfast
- 10:00am Session 1 - Introductions
Moderator:
- 10:00am Participant Self-Introductions
- 10:15am Barry Smith: Ontology, the OBO Foundry, and the Scope of this Meeting
- 11:00am Refreshment Break
- 11:15am Session 1: The Range of Phenomena We Are Trying to Address (Moderator: TBD)
Topics:
- Types of pathways (signalling pathways, metabolic pathways, ...)
- Types of networks (regulatory networks, interaction networks, gene expression correlation networks, physiological networks, neurocurrent networks, water balance networks, social networks, co-citation networks ...)
- Types of regulation (hormone regulation, organismal regulation, thermal regulation, blood pressure regulation ...)
- Granularity (molecular, cellular, physiological) ...
- What are the nodes? (molecules, pools of molecules?)
- 1:00pm Lunch Break
- 2:00pm Session 3: Existing Resources in Network and Pathway Ontology (Moderator: TBD)
- Ken Fukuda: IMOH
- Balaji S. Srinivasan: Current Progress on Network Ontology
- Peter d'Eustachio: Reactome
- BioPAX
- 3:15pm Refreshment Break
- 3:30pm Session 4: What are the Gaps (Moderator: Alan Ruttenberg)
- Possible presenters?
- 5:00pm End of Day 1
Friday, March 28, 2008
- 8:30am Continental Breakfast
- 9:00am Session 3: Networks and Modules (Moderator: Richard Scheuermann)
- Possible presenters?
- 10:45am Refreshment Break
- Session 4 - Cellular Networks and their Surroundings: Tissues, the Extracellular Matrix, and Cell-Environment Interactions
(Moderator: Yves Lussier)
- Possible presenters?
- 1pm Lunch Break
- 2:00 Session 5 - The Next Steps (Moderator: TBD)
- 4:00pm End of Day 2