Difference between revisions of "Meetings and Events"
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*September 3-4, 2009, University of Milan, Biccaca, Italy | *September 3-4, 2009, University of Milan, Biccaca, Italy | ||
*Co-sponsored by the Italian National Research Council | *Co-sponsored by the Italian National Research Council | ||
| − | *Follow-up from | + | *Follow-up from [http://www.bioontology.org/wiki/index.php/DallasWorkshop 2008 NCBO Clinical Phenotypes meeting] |
'''International Conference on Biomedical Ontology (ICBO) [http://icbo.buffalo.edu ↑]''' | '''International Conference on Biomedical Ontology (ICBO) [http://icbo.buffalo.edu ↑]''' | ||
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*September 3-4, 2008, Dallas, TX | *September 3-4, 2008, Dallas, TX | ||
*NCBO Dissemination Workshop | *NCBO Dissemination Workshop | ||
| − | *[http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf Publication] [http://code.google.com/p/ogms/ Ontology] | + | *[http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf Publication]; [http://code.google.com/p/ogms/ Ontology]; [http://bimib.disco.unimib.it/index.php/SSFW09 Follow-Up Meeting] |
'''How to Make Useful Ontologies for Biomedicine [http://www.bioontology.org/wiki/index.php/How_to_Make_Useful_Ontologies_for_Biomedicine ↑]''' | '''How to Make Useful Ontologies for Biomedicine [http://www.bioontology.org/wiki/index.php/How_to_Make_Useful_Ontologies_for_Biomedicine ↑]''' | ||
| Line 80: | Line 80: | ||
*March 27-30, 2007, Dagstuhl, Germany | *March 27-30, 2007, Dagstuhl, Germany | ||
*NCBO Dissemination Workshop | *NCBO Dissemination Workshop | ||
| + | *[http://drops.dagstuhl.de/opus/volltexte/2008/1628/pdf/07132.Dagstuhl.1628.pdf Seminar Report] | ||
'''The OBO Foundry - A Gold Standard Approach to Ontology Evaluation [http://ontolog.cim3.net/cgi-bin/wiki.pl?ConferenceCall_2006_12_21#nidRW3 ↑] | '''The OBO Foundry - A Gold Standard Approach to Ontology Evaluation [http://ontolog.cim3.net/cgi-bin/wiki.pl?ConferenceCall_2006_12_21#nidRW3 ↑] | ||
| Line 95: | Line 96: | ||
'''Panel on the Future of HL7 [http://ontology.buffalo.edu/HL7/panel.htm ↑]''' | '''Panel on the Future of HL7 [http://ontology.buffalo.edu/HL7/panel.htm ↑]''' | ||
* AMIA Anual Symposium, November 14, 2006, Washington DC | * AMIA Anual Symposium, November 14, 2006, Washington DC | ||
| + | * [http://ontology.buffalo.edu/HL7/AMIA_06_audio Audio]; [http://ontology.buffalo.edu/hl7/AMIA_06.ppt Smith Slides]; [http://www.org.buffalo.edu/RTU/papers/HL7-AMIA2006.ppt Ceusters Slides] | ||
'''Genomics Knowledge Representation for Clinical Trials [http://ontology.buffalo.edu/06/AMIAWorkshop.htm ↑]''' | '''Genomics Knowledge Representation for Clinical Trials [http://ontology.buffalo.edu/06/AMIAWorkshop.htm ↑]''' | ||
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*November 8, 2006, Baltimore, MD | *November 8, 2006, Baltimore, MD | ||
*Symposium of the Working Group on Formal (Bio-)Medical Knowledge Representation of the American Medical Informatics Association (KR-MED) | *Symposium of the Working Group on Formal (Bio-)Medical Knowledge Representation of the American Medical Informatics Association (KR-MED) | ||
| + | *[http://mor.nlm.nih.gov/pubs/pdf/2009-ao-editorial-ob.pdf Publication] | ||
'''Ontology of Diseases [http://www.bioontology.org/wiki/index.php/Workshop_on_Ontology_of_Diseases ↑]''' | '''Ontology of Diseases [http://www.bioontology.org/wiki/index.php/Workshop_on_Ontology_of_Diseases ↑]''' | ||
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*September 8-9, 2006, University of Washington, Seattle, WA | *September 8-9, 2006, University of Washington, Seattle, WA | ||
*NCBO Dissemination Workshop | *NCBO Dissemination Workshop | ||
| − | *[https://www.nescent.org/wg/phenoscape/images/9/91/Caroreprint.pdf Publication] [http://www.obofoundry.org/cgi-bin/detail.cgi?id=caro Ontology] | + | *[https://www.nescent.org/wg/phenoscape/images/9/91/Caroreprint.pdf Publication]; [http://www.obofoundry.org/cgi-bin/detail.cgi?id=caro Ontology] |
'''Tutorial on Standards and Ontologies [http://ontology.buffalo.edu/06/MIE_Tutorial.htm ↑] | '''Tutorial on Standards and Ontologies [http://ontology.buffalo.edu/06/MIE_Tutorial.htm ↑] | ||
| Line 139: | Line 142: | ||
'''Functional Genomics Investigation Ontology (FuGO) 2nd Workshop [http://sourceforge.net/projects/fugo/files/Presentations/Workshop-Jul_2006/ ↑]'''. [http://internap.dl.sourceforge.net/sourceforge/obi/REPORT-2nd-FuGO-Workshop-July06-EBI.doc Report] | '''Functional Genomics Investigation Ontology (FuGO) 2nd Workshop [http://sourceforge.net/projects/fugo/files/Presentations/Workshop-Jul_2006/ ↑]'''. [http://internap.dl.sourceforge.net/sourceforge/obi/REPORT-2nd-FuGO-Workshop-July06-EBI.doc Report] | ||
*July 24-28, 2006, European Bioinformatics Institute, Cambridge, Hinxton, UK | *July 24-28, 2006, European Bioinformatics Institute, Cambridge, Hinxton, UK | ||
| + | *This meeting led to creation of [http://obi-ontology.org/ OBI] Ontology for Biomedical Investigations | ||
| − | '''Ontology Visualization with [ | + | '''Ontology Visualization with Jambalaya [http://protege.stanford.edu/conference/2006/tutorials.html ↑]''' |
*July 23-26, 2006, Stanford, CA | *July 23-26, 2006, Stanford, CA | ||
*NCBO Tutorial (Faculty: Chris Callendar) | *NCBO Tutorial (Faculty: Chris Callendar) | ||
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*July 19, 2006, NIH, Bethesda, MD | *July 19, 2006, NIH, Bethesda, MD | ||
*Presentation by Mark Musen and Barry Smith at NCBC All Hands Meeting [http://www.bisti.nih.gov/ahm2006/] | *Presentation by Mark Musen and Barry Smith at NCBC All Hands Meeting [http://www.bisti.nih.gov/ahm2006/] | ||
| − | + | *[http://www.bisti.nih.gov/ahm2006/Presentations/NCBO/Dissemination/Musen_AHM_Dissemination_Event.pdf Musen Slides]; [http://www.bisti.nih.gov/ahm2006/Presentations%5CNCBO%5CDissemination%5CSmith_OBOFoundry_071906.ppt Smith Slides] | |
| + | |||
'''Training Course in Biomedical Ontologies [http://ontology.buffalo.edu/06/os2/index.html ↑]''' | '''Training Course in Biomedical Ontologies [http://ontology.buffalo.edu/06/os2/index.html ↑]''' | ||
*May 21-24, 2006, Schloss Dagstuhl, Germany | *May 21-24, 2006, Schloss Dagstuhl, Germany | ||
Revision as of 10:11, 26 December 2009
NCBO-Sponsored Dissemination and Training Events 2005-2009
The Future of the Foundational Model of Anatomy ↑
- November 11-12, 2009, Stanford, CA
- NCBO Dissemination Workshop
- Discussion page
From Aristotle to the Universal Core: Ontology Training Event ↑
- October 10-11, 2009, Buffalo, NY
- Co-sponsored with the University at Buffalo
Signs, Symptoms and Findings: Towards an Ontology for Clinical Phenotypes ↑
- September 3-4, 2009, University of Milan, Biccaca, Italy
- Co-sponsored by the Italian National Research Council
- Follow-up from 2008 NCBO Clinical Phenotypes meeting
International Conference on Biomedical Ontology (ICBO) ↑
- July 27-29, 2009, Buffalo, NY
- Co-sponsored by the National Center for Ontological Research and the University at Buffalo
- Proceedings
International Consensus Workshop: Convergence on an Orofacial Pain Taxonomy ↑
- Mar 30-Apr 1, 2009, Miami, FL
- Co-sponsored by the International Association for Dental Research
InterOntology 2009 ↑
- Feb 27-Mar 1, 2009, Keio University, Tokyo, Japan
- Special session on Biomedical Ontologies co-organized with the Japanese Center for Ontological Research
Evolutionary Biology and Ontologies ↑
- January 5, 2009, Boston, MA
- Co-sponsored by the National Evolutionary Synthesis Center (NESCent)
Signs, Signs, Symptoms and Findings: First Steps Toward an Ontology of Clinical Phenotypes ↑
- September 3-4, 2008, Dallas, TX
- NCBO Dissemination Workshop
- Publication; Ontology; Follow-Up Meeting
How to Make Useful Ontologies for Biomedicine ↑
- July 19, 2008, Toronto, Canada.
- NCBO Tutorial at ISMB 2008 (Faculty: Nigam Shah and Barry Smith)
Evolutionary Biology and Ontologies ↑
- June 20, 2008, Minneapolis, MN
- Held in conjunction with the ↑ Evolution 2008 meeting.
- Co-sponsored by the National Evolutionary Synthesis Center (NESCent)
Introduction to Biomedical Ontologies ↑
- April 12-13, 2008, Buffalo, NY
- NCBO Tutorial (Faculty: Barry Smith)
Ontologies of Cellular Networks ↑
- March 27-28, 2008, Newark, NJ
- NCBO Dissemination Workshop
- Publication
Joint JCOR-NCBO International Biomedical Ontology Dissemination Workshop ↑
- February 26-27, 2008, Tokyo, Japan
- NCBO Dissemination Workshop
- Co-sponsored with the Japanese Center for Ontological Research
Dagstuhl Seminar: Ontologies and Text Mining for Life Sciences ↑
- July 23-27, 2007: Schloss Dagstuhl, Germany
- Organizers: Ulf Leser, Dietrich Rebholz-Schuhmann and Michael Ashburner
- Proceedings
Ontologies for Biomedicine – How to Make and Use Them ↑
- July 21, 2007, Vienna, Austria
- NCBO Tutorial at ISMB 2007 (Faculty: Nigam Shah and Barry Smith)
Reasoning with Biomedical Information: Training Course in Logic for Biomedical Research ↑
- June 20-23, 2007, Schloss Dagstuhl, Germany
- NCBO Training Workshop, organized in conjunction with the Institute for Formal Ontology and Medical Information Science, Saarbrücken, German
Clinical Trial Ontology ↑
- May 16-17 2007, NIH Campus, Bethesda, MD
- NCBO Dissemination Workshop
Dagstuhl Seminar: Ontology Interoperability in Biomedicine ↑
- March 27-30, 2007, Dagstuhl, Germany
- NCBO Dissemination Workshop
- Seminar Report
The OBO Foundry - A Gold Standard Approach to Ontology Evaluation ↑
- December 1-2, 2006, Clark Center, Stanford, CA
- NCBO Dissemination Workshop
Connecting BioPAX to Other Biomedical Ontologies ↑
- November 20-21, 2006, MIT, Boston, MA
- NCBO Tutorial (Faculty: Barry Smith)
Panel on the Future of HL7 ↑
- AMIA Anual Symposium, November 14, 2006, Washington DC
- Audio; Smith Slides; Ceusters Slides
Genomics Knowledge Representation for Clinical Trials ↑
- AMIA Annual Symposium, November 12, 2006, Washington DC
- Tutorial (Faculty: Nigam Shah, Barry Smith, and others)
Biomedical Imaging Ontologies ↑
- November 11, 2006, AMIA Annual Symposium, Washington DC
- NCBO Dissemination Workshop
Biomedical Ontology in Action ↑
- November 8, 2006, Baltimore, MD
- Symposium of the Working Group on Formal (Bio-)Medical Knowledge Representation of the American Medical Informatics Association (KR-MED)
- Publication
Ontology of Diseases ↑
- November 6-7, 2006, John Hopkins University, Baltimore
- NCBO Dissemination Workshop organized in association with the Formal Ontology and Information Systems (FOIS 2006) Conference
The Philosophy of Biology ↑
- October 14-15, 2006, Buffalo, NY
- NCBO Dissemination Workshop
Ontology Development ↑
- September 11-13, 2006, European Bioinformatics Institute, Hinxton, Cambridge, UK.
- Genomics Standards Consortium Workshop, co-sponsored with the National Institute for Environmental e-Science (NIEeS)
Anatomy Ontology Workshop http://www.bioontology.org/wiki/index.php/Anatomy_Ontology_Workshop ↑]
- September 8-9, 2006, University of Washington, Seattle, WA
- NCBO Dissemination Workshop
- Publication; Ontology
Tutorial on Standards and Ontologies ↑
- August 27, 2006, Maastricht, Netherlands.
- NCBO Tutorial, organized in conjunction with the Medical Informatics Europe 2006 Conference (Faculty: Barry Smith and Werner Ceusters)
Ontologies for Biomedicine – How to Make and Use Them ↑
- August 14-18, 2006. Stanford University
- Tutorial at [IEEE Computational Systems Bioinformatics, 2006 http://www.lifesciencessociety.org/CSB2006/index.html] Conference (Faculty: Amar Das, Nigam Shah)
On the Need and Utility of Ontologies ↑"
- Jul 30-August 4, 2006, Fortaleza, Brazil.
- Presentation by Michael Ashburner at the Conference In Silico Analysis of Proteins. Celebrating the 20th Anniversary of Swiss-Prot.
Functional Genomics Investigation Ontology (FuGO) 2nd Workshop ↑. Report
- July 24-28, 2006, European Bioinformatics Institute, Cambridge, Hinxton, UK
- This meeting led to creation of OBI Ontology for Biomedical Investigations
Ontology Visualization with Jambalaya ↑
- July 23-26, 2006, Stanford, CA
- NCBO Tutorial (Faculty: Chris Callendar)
Scientific Ontologies ↑
- July 17-19, 2006, NIH, Bethesda, MD
- i2b2, NAMIC and NCBO sponsored SIG session at NCBC All Hands Meeting [1]
Ontology: A Vision for the Future and Its Realization ↑
- July 19, 2006, NIH, Bethesda, MD
- Presentation by Mark Musen and Barry Smith at NCBC All Hands Meeting [2]
- Musen Slides; Smith Slides
Training Course in Biomedical Ontologies ↑
- May 21-24, 2006, Schloss Dagstuhl, Germany
- NCBO Training Event (Faculty: Olivier Bodenreider, Werner Ceusters, Mark Musen, Barry Smith), organized jointly with the Institute for Formal Ontology and Medical Information Science, Saarbrücken, German
Phenotype Annotation Meeting ↑
- May 17-20, 2006, European Bioinformatics Institute, Hinxton, Cambridge, UK
- NCBO Dissemination Workshop
Principles of Biomedical Ontology Design ↑
- March 31-April 3, 2006, St. Croix
- NCBO Tutorial by Barry Smith at the [Gene Ontology Consortium Meeting http://www.geneontology.org/minutes/20060331_StCroix.pdf]
The Ontology of Images ↑
- March 24-25, 2006, Stanford, CA
- NCBO Dissemination Workshop
Ontology Workshop: Focus on Immunology ↑
- March 21-22, 2006, Gaitherburg, MD
- Sponsored by NIAID/DAIT at the 2006 American Association of Immunologists (AAI) Annual Meeting
Navigating the Translational Researcher Through a Complex of Animal and Biological Resources ↑
- March 6-7, 2006, Bethesda, MD
- Presentation by Monte Westerfield on Animal Models and Ontologies
BIRN ontology workshop
- February 28-March 1, 2006, Stanford, CA
- Tutorial by Barry Smith: "Critical Review of BIRN Ontologies" Part 1 Part 2
- NCBO Dissemination Workshop
Functional Genomics Investigation Ontology (FuGO): First Workshop ↑
- February 13-15, 2006, Philadelphia, PA
- Attending: Barry Smith
NIAID BRC3 and Interoperability Working Group meeting
- February 6-7, 2006, Philadelphia, PA
- http://www.niaid.nih.gov/dmid/genomes/brc/brc3.htm ↑
- Attending: Suzanna Lewis, Barry Smith
International Biocurator Meeting ↑
- December 8-11, 2005, Asilomar, CA
- Attending: Sima Misra (organizer), Chris Mungall (speaker), Monte Westerfield (speaker)
Phenotype Ontology Content Workshop ↑
- Nov. 19-20, 2005, Cold Spring Harbor, NY
- Attending: Michael Ashburner, John Day-Richter, George Gkoutos, Suzanna Lewis, Chris Mungall, Mark Musen, Erik Segerdell, Nigam Shah, Monte Westerfield
Workshop on Bio-Ontologies ↑
- October 28, 2005, Buffalo, NY
- Presenting: Suzanna Lewis, Frank Hartel, Sumi Yoshikawa, Olivier Bodenreider
- NCBO Training Workshop: Making Ontologies Better (Faculty: David Hill and Barry Smith) Slides