Difference between revisions of "SWAT4LS Tutorial"
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(Created page with "== What You Need to Participate == * BioPortal API Key - get your API Key by registering for an account on [http://bioportal.bioontology.org/accounts/new BioPortal] * Computer wi...") |
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| Line 8: | Line 8: | ||
* Introduction to REST Web services | * Introduction to REST Web services | ||
* [http://bioportal.bioontology.org NCBO BioPortal] | * [http://bioportal.bioontology.org NCBO BioPortal] | ||
| − | * [http://www.bioontology.org/wiki/index.php/NCBO_REST_services | + | * NCBO REST Web services |
| − | + | ** [http://www.bioontology.org/wiki/index.php/NCBO_REST_services Ontology Web services] - Search, Traverse, Download | |
| − | ** Notes Web service - Propose Terms, Comment | + | ** [http://www.bioontology.org/wiki/index.php/View_Extraction View Extraction Web service] - Subset |
| − | ** Mapping Web services - Create, Upload, Download | + | ** [http://www.bioontology.org/wiki/index.php/Ontology_Notes Notes Web service] - Propose Terms, Comment |
| − | ** Widgets - Tree view, Auto-complete, Graph view | + | ** [http://www.bioontology.org/wiki/index.php/BioPortal_Mappings_Service Mapping Web services] - Create, Upload, Download |
| − | ** Annotation - Ontology Term recognition | + | ** [http://www.bioontology.org/wiki/index.php/NCBO_Widgets Widgets] - Tree view, Auto-complete, Graph view |
| − | ** Data Access - Fetch ontology-indexed data | + | ** [http://www.bioontology.org/wiki/index.php/Annotator_Web_service Annotation] - Ontology Term recognition |
| + | ** [http://www.bioontology.org/wiki/index.php/Resource_Index Data Access] - Fetch ontology-indexed data | ||
* BioPortal SPARQL Endpoint - Access Ontologies via SPARQL | * BioPortal SPARQL Endpoint - Access Ontologies via SPARQL | ||
Revision as of 17:59, 4 December 2011
What You Need to Participate
- BioPortal API Key - get your API Key by registering for an account on BioPortal
- Computer with Internet connection
- Software editor of your choice
- Sample code will be demonstrated in both Java and Perl
Content
- Introduction to REST Web services
- NCBO BioPortal
- NCBO REST Web services
- Ontology Web services - Search, Traverse, Download
- View Extraction Web service - Subset
- Notes Web service - Propose Terms, Comment
- Mapping Web services - Create, Upload, Download
- Widgets - Tree view, Auto-complete, Graph view
- Annotation - Ontology Term recognition
- Data Access - Fetch ontology-indexed data
- BioPortal SPARQL Endpoint - Access Ontologies via SPARQL