DRAFT AGENDA
Preliminary Agenda
Thursday, March 27, 2008
- 9:00am Registration and Continental Breakfast
- 9:30am Participant Self-Introductions
- 10:00am Session 1 - Biology of Pathways and Networks (Moderator: Yves Lussier)
- Potential presenters:
- Fiona Brinkman
- Nancy Gough
- Yves Lussier
- Chris Sander
- Stuart Sealfon
- Potential topics:
- signalling pathways, metabolic pathways, ...
- regulatory networks, interaction networks, gene expression correlation networks, physiological networks, neurocurrent networks, water balance networks, social networks, co-citation networks ...)
- types of regulation (hormone regulation, organismal regulation, thermal regulation, blood pressure regulation ...)
- granularity (molecular, cellular, physiological) ...
- cellular networks and their surroundings: tissues, the extracellular matrix, and cell-environment interactions
- 11:00am Refreshment Break
- 11:15am
- 12:30pm Lunch Break
- 1:30pm Session 2 - Computational Analysis of Pathway and Network Data (Moderator: Alan Ruttenberg)
- Potential presenters:
- Avi Ma'ayan
- Peter Lyster
- Andre Rhzetsky
- Oliver Ruebenacker
- Richard Scheuermann
- Andrea Splendiani
- 3:30pm Refreshment Break
- 3:45pm Session 3 - Introduction to Ontology (Moderator: Barry Smith)
- Potential presenters
- Lindsay Cowell
- Barry Smith
- J. L. E. Mejino Jr.
- 5:00pm End of Day 1
Friday, March 28, 2008 - NETWORK DAY
- 8:30am Continental Breakfast
- 9:00am Session 4: Current Approaches to Pathway and Network Ontology (Moderator: Richard Scheuermann)
- Potential presenters:
- Bill Bug
- Peter d'Eustachio: Reactome
- Ken Fukuda: INOH Pathway Database
- Darren Natale: Protein Ontology
- Balaji S. Srinivasan
- 10:45am Refreshment Break
- 11:00am
- 12.30pm Lunch Break
- 1:30 Session 5 - Gaps in Network Ontology (Moderator: Alan Ruttenberg)
- Open discussion; resenters and topics to be decided
- (example:) Approaches to extending the OBO Foundry to include pathway and network ontologies
- 4:00pm End of Day 2