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Welcome to the NCBO Public WIKI. This WIKI provides information about collaborative ontology development efforts, dissemination events conducted by the NCBO and publically shared materials from the NCBO. Please visit our Main Site for more information and materials.

NCBO Links

Shared Materials

Public Requirements

Shared Materials

Evaluation Activities

NCBC Links

Home page of National Centers for Biomedical Computing

NCBC Software and Data Integration Working Group (SDIWG) and Centers Discussion

NCBC Scientific Ontologies Working Group

Ontology Development Area

Below are wikis for some of the current OBO ontologies. Each wiki is housed on the bioontologies.org wiki, in its own partition (wikispace) of the main wiki

PATO:Main_Page - An ontology of phenotypic qualities

RO:Main_Page - OBO Relations ontology

CARO:Main_Page - Reference anatomical ontology

CL:Main_Page - OBO Cell ontology

SO:Main_Page - Sequence Ontology

Disease:Main_Page - Disease Ontology, and other ontologies pertaining to diseases and disorders

OCI:Main_Page - Ontology of Clinical Investigation

Note that each ontology lives in its own wikispace which corresponds to the OBO:IDSpace of that ontology. Note for wiki editors: all wiki pages that are to be considered local to a particular ontology should be prefixed with that IDSpace.

Software Development Area

OboInOwl:Main_Page - Mapping between OBO and OWL formats
Phenote:Main_Page - A Phenotype Annotation Tool using Ontologies
Bioportal:Main_Page - Main page for accessing Bioportal
NCBO-OOR Development - Documentation on how the Open Ontology Repository community can customize and advance BioPortal capabilities.
Processing_OBR_Resources - Notes on resources being processed

NCBO Web services

BioPortal REST services - Documentation on how to use our Ontology services
NCBO_REST_services -
UMLS_REST_Services - Documentation on how to use our prototype UMLS services (NetKernel)
Annotator Web service
Resource index Web services